Can't herlp with 2 but bonnet adjustment is easily done and crops up on here very regularly. My Internet is v slow at moment but have a look in the maintenance guides.

As long as the crank had been rotated back the 60° then 2. won't have caused any problem at all.   

Great and thanks a lot everyone.  Found there was recent post re bonnet problem, but I can't remove plastic trims as all my phillip head dont fit directly into screws.

Secondly, was able to remove cams although exhaust one was difficult to remove as it seemed to be stuck.  Yes I did undo/removed all caps but I had to go eurocarparts to obtain a breaker bar to undo bolts. Delivery takes about 4 days, so nothing doing untill then.

I also saw some brown stuff on some of the lobes, appears to be like burn marks.  Any ideas what these are and is there a prolem with cams now or how can they  be removed

Appreciation in advance.